STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4507Inositol monophosphatase. (247 aa)    
Predicted Functional Partners:
Psyr_1233
Inositol monophosphatase.
  
  
 
0.924
iolG
Myo-inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
    
 0.907
Psyr_4506
Glycerophosphodiester phosphodiesterase.
     
 0.783
Psyr_4502
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; TC 3.A.1.1.-.
       0.778
Psyr_4503
Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-.
       0.778
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
       0.778
Psyr_4505
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
       0.778
Psyr_4508
Endo-1,4-beta-xylanase.
       0.773
cysQ
3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
 
   
 0.735
nusG
Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.
   
 
 0.606
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.