STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX51_04647Pinin_SDK_memA domain-containing protein. (354 aa)    
Predicted Functional Partners:
GX51_07589
RNA-binding protein with serine-rich domain 1.
   
 0.984
GX51_04238
Histone deacetylase complex subunit.
    
 0.968
GX51_06243
SAP domain-containing protein.
   
 0.965
GX51_08164
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family.
    
 0.919
GX51_05949
Protein mago nashi.
   
 0.905
GX51_00194
CMGC/DYRK/PRP4 protein kinase.
   
  0.893
GX51_02953
Serine/arginine repetitive matrix protein 1.
   
 0.890
GX51_05634
RRM domain-containing protein.
    
 0.840
GX51_00388
RRM domain-containing protein.
   
 
 0.840
GX51_00132
Polyadenylate-binding protein 2.
   
 0.824
Your Current Organism:
Blastomyces parvus
NCBI taxonomy Id: 2060905
Other names: B. parvus, Blastomyces parvus (Emmons & Ashburn) Y. Jiang, Sigler & de Hoog, 2018, Blastomyces sp. BGE-2017b, CBS 139881, Emmonsia parva, Emmonsia parva var. parva, Haplosporangium parvum, UAMH 130
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.