STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN31126.1DNA-binding protein Fis. (504 aa)    
Predicted Functional Partners:
SDN31373.1
PAS domain S-box-containing protein.
   
 0.989
SDN70628.1
PAS domain S-box-containing protein.
   
 0.978
SDN87681.1
PAS domain S-box-containing protein.
   
 0.978
SDN40562.1
PAS domain S-box-containing protein.
   
 0.935
SDN96124.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.933
SDN69657.1
Signal transduction histidine kinase.
   
 0.874
SDN50155.1
Adenylate cyclase.
    
  0.867
SDN31159.1
Indolepyruvate ferredoxin oxidoreductase beta subunit.
       0.800
SDN91668.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.796
SDN48151.1
GAF domain-containing protein.
    
 0.792
Your Current Organism:
Desulfonauticus submarinus
NCBI taxonomy Id: 206665
Other names: CIP 107713, D. submarinus, DSM 15269, Desulfonauticus submarinus Audiffrin et al. 2003, strain 6N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.