STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL1335Probable endo-beta-N-acetylglucosaminidase; COG family: pkd repeat proteins; PFAM_ID: PKD. (937 aa)    
Predicted Functional Partners:
BL1333
Narrowly conserved hypothetical protein.
 
   
 0.819
BL1332
Probable sugar permease of ABC transporter system; COG family: sugar permeases; PFAM_ID: BPD_transp.
  
  
 0.746
BL1331
COG family: ABC-type sugar transport systems, permease components; PFAM_ID: BPD_transp.
     
 0.740
BL1327
Alpha-mannosidase; alpha-D-mannoside mannohydrolase; COG family: alpha-mannosidase; PFAM_ID: Glyco_hydro_38; PFAM_ID: Glyco_hydro_38.
 
   
 0.725
BL1338
Narrowly conserved hypothetical protein; COG family: uncharacterized Acr.
 
     0.705
BL0056
Possible beta-hexosaminidase A; N-acetyl-beta-glucosaminidase; beta-N-acetylhexosaminidase; COG family: N-acetyl-beta-hexosaminidase; PFAM_ID: Glyco_hydro_20.
 
  
 0.632
BL1334
Probable pentosidase or hexosidase; COG family: alpha-glucosidases, family 31 of glycosyl hydrolases; PFAM_ID: Glyco_hydro_31; PFAM_ID: Glyco_hydro_31; Belongs to the glycosyl hydrolase 31 family.
       0.630
BL1337
Narrowly conserved hypothetical protein with possible isomerase function; COG family: N-acyl-D-glucosamine 2-epimerase.
      
 0.577
BL1329
Alpha-mannosidase; alpha-D-mannoside mannohydrolase; COG family: alpha-mannosidase; PFAM_ID: Glyco_hydro_38.
 
     0.470
BL1328
Alpha-mannosidase; alpha-D-mannoside mannohydrolase; COG family: alpha-mannosidase; PFAM_ID: Glyco_hydro_38; PFAM_ID: Glyco_hydro_38.
 
     0.420
Your Current Organism:
Bifidobacterium longum
NCBI taxonomy Id: 206672
Other names: B. longum NCC2705, Bifidobacterium longum NCC2705, Bifidobacterium longum str. NCC2705
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.