Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CJF30_00000498 | CJF30_00004133 | A0A2S7QGW5 | A0A2S7QRD2 | 60S ribosomal L9 protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.987 |
| CJF30_00000498 | CJF30_00004146 | A0A2S7QGW5 | A0A2S7QRE7 | 60S ribosomal L9 protein. | Fungal specific transcription factor protein. | 0.677 |
| CJF30_00000498 | CJF30_00005571 | A0A2S7QGW5 | A0A2S7P376 | 60S ribosomal L9 protein. | Acetylserotonin methytransferase protein. | 0.976 |
| CJF30_00000498 | CJF30_00009935 | A0A2S7QGW5 | A0A2S7QD97 | 60S ribosomal L9 protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.952 |
| CJF30_00000498 | MED17 | A0A2S7QGW5 | A0A2S7QPM9 | 60S ribosomal L9 protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.985 |
| CJF30_00002477 | CJF30_00003931 | A0A2S7PE57 | A0A2S7QR54 | N-acetyltransferase domain-containing protein. | Polyketide synthase protein. | 0.679 |
| CJF30_00002477 | CJF30_00004146 | A0A2S7PE57 | A0A2S7QRE7 | N-acetyltransferase domain-containing protein. | Fungal specific transcription factor protein. | 0.775 |
| CJF30_00002477 | CJF30_00006986 | A0A2S7PE57 | A0A2S7PJD8 | N-acetyltransferase domain-containing protein. | Acyl carrier protein. | 0.870 |
| CJF30_00002477 | CJF30_00007324 | A0A2S7PE57 | A0A2S7P005 | N-acetyltransferase domain-containing protein. | PKS_KS domain-containing protein. | 0.679 |
| CJF30_00003931 | CJF30_00002477 | A0A2S7QR54 | A0A2S7PE57 | Polyketide synthase protein. | N-acetyltransferase domain-containing protein. | 0.679 |
| CJF30_00003931 | CJF30_00004146 | A0A2S7QR54 | A0A2S7QRE7 | Polyketide synthase protein. | Fungal specific transcription factor protein. | 0.776 |
| CJF30_00003931 | CJF30_00006986 | A0A2S7QR54 | A0A2S7PJD8 | Polyketide synthase protein. | Acyl carrier protein. | 0.968 |
| CJF30_00003931 | CJF30_00007324 | A0A2S7QR54 | A0A2S7P005 | Polyketide synthase protein. | PKS_KS domain-containing protein. | 0.793 |
| CJF30_00004133 | CJF30_00000498 | A0A2S7QRD2 | A0A2S7QGW5 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 60S ribosomal L9 protein. | 0.987 |
| CJF30_00004133 | CJF30_00004146 | A0A2S7QRD2 | A0A2S7QRE7 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Fungal specific transcription factor protein. | 0.674 |
| CJF30_00004133 | CJF30_00005571 | A0A2S7QRD2 | A0A2S7P376 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Acetylserotonin methytransferase protein. | 0.989 |
| CJF30_00004133 | CJF30_00009935 | A0A2S7QRD2 | A0A2S7QD97 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.998 |
| CJF30_00004133 | MED17 | A0A2S7QRD2 | A0A2S7QPM9 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.998 |
| CJF30_00004146 | CJF30_00000498 | A0A2S7QRE7 | A0A2S7QGW5 | Fungal specific transcription factor protein. | 60S ribosomal L9 protein. | 0.677 |
| CJF30_00004146 | CJF30_00002477 | A0A2S7QRE7 | A0A2S7PE57 | Fungal specific transcription factor protein. | N-acetyltransferase domain-containing protein. | 0.775 |
page 1 of 3