Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY43489.1 | arcC1 | BG845_00432 | BG845_00433 | Membrane protein FdrA. | Carbamate kinase 1; Belongs to the carbamate kinase family. | 0.930 |
OSY43489.1 | arcC2 | BG845_00432 | BG845_01587 | Membrane protein FdrA. | Carbamate kinase 2; Belongs to the carbamate kinase family. | 0.754 |
arcC1 | OSY43489.1 | BG845_00433 | BG845_00432 | Carbamate kinase 1; Belongs to the carbamate kinase family. | Membrane protein FdrA. | 0.930 |
arcC1 | arcC2 | BG845_00433 | BG845_01587 | Carbamate kinase 1; Belongs to the carbamate kinase family. | Carbamate kinase 2; Belongs to the carbamate kinase family. | 0.911 |
arcC1 | argF | BG845_00433 | BG845_06047 | Carbamate kinase 1; Belongs to the carbamate kinase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.991 |
arcC1 | gdhA | BG845_00433 | BG845_02245 | Carbamate kinase 1; Belongs to the carbamate kinase family. | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.905 |
arcC1 | glnA_1 | BG845_00433 | BG845_01971 | Carbamate kinase 1; Belongs to the carbamate kinase family. | Glutamine synthetase. | 0.906 |
arcC1 | glnA_2 | BG845_00433 | BG845_04756 | Carbamate kinase 1; Belongs to the carbamate kinase family. | Glutamine synthetase. | 0.906 |
arcC1 | glnA_3 | BG845_00433 | BG845_05186 | Carbamate kinase 1; Belongs to the carbamate kinase family. | Putative glutamine synthetase 2. | 0.906 |
arcC1 | glnT_1 | BG845_00433 | BG845_04541 | Carbamate kinase 1; Belongs to the carbamate kinase family. | Glutamine synthetase 3. | 0.906 |
arcC1 | glnT_2 | BG845_00433 | BG845_04547 | Carbamate kinase 1; Belongs to the carbamate kinase family. | Glutamine synthetase 3. | 0.906 |
arcC1 | gluD | BG845_00433 | BG845_04459 | Carbamate kinase 1; Belongs to the carbamate kinase family. | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.905 |
arcC2 | OSY43489.1 | BG845_01587 | BG845_00432 | Carbamate kinase 2; Belongs to the carbamate kinase family. | Membrane protein FdrA. | 0.754 |
arcC2 | arcC1 | BG845_01587 | BG845_00433 | Carbamate kinase 2; Belongs to the carbamate kinase family. | Carbamate kinase 1; Belongs to the carbamate kinase family. | 0.911 |
arcC2 | argF | BG845_01587 | BG845_06047 | Carbamate kinase 2; Belongs to the carbamate kinase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.990 |
arcC2 | gdhA | BG845_01587 | BG845_02245 | Carbamate kinase 2; Belongs to the carbamate kinase family. | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.905 |
arcC2 | glnA_1 | BG845_01587 | BG845_01971 | Carbamate kinase 2; Belongs to the carbamate kinase family. | Glutamine synthetase. | 0.906 |
arcC2 | glnA_2 | BG845_01587 | BG845_04756 | Carbamate kinase 2; Belongs to the carbamate kinase family. | Glutamine synthetase. | 0.906 |
arcC2 | glnA_3 | BG845_01587 | BG845_05186 | Carbamate kinase 2; Belongs to the carbamate kinase family. | Putative glutamine synthetase 2. | 0.906 |
arcC2 | glnT_1 | BG845_01587 | BG845_04541 | Carbamate kinase 2; Belongs to the carbamate kinase family. | Glutamine synthetase 3. | 0.906 |
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