STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY38488.1Luciferase-like monooxygenase. (359 aa)    
Predicted Functional Partners:
gsiB_6
Glutathione-binding protein GsiB precursor.
 
     0.802
gsiC_5
Glutathione transport system permease protein GsiC.
  
    0.779
ddpC_1
Putative D,D-dipeptide transport system permease protein DdpC.
       0.778
gsiA_5
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
       0.774
ydbM
Putative acyl-CoA dehydrogenase YdbM.
 
    0.752
msuD_1
Methanesulfonate monooxygenase.
 
     0.737
alkB
Alkane 1-monooxygenase.
      
 0.618
OSY38495.1
Putative FAD-linked oxidoreductase.
       0.610
luxA_7
Alkanal monooxygenase alpha chain.
  
     0.540
OSY34613.1
3,6-diketocamphane 1,6 monooxygenase.
  
     0.435
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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