STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dde_1109KEGG: dvl:Dvul_2137 adenylylsulfate reductase subunit beta; TIGRFAM: Adenylylsulphate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup. (162 aa)    
Predicted Functional Partners:
Dde_1110
TIGRFAM: Adenylylsulphate reductase, alpha subunit; KEGG: dvl:Dvul_2136 adenylylsulfate reductase subunit alpha.
 
 0.999
Dde_0526
TIGRFAM: Sulphite reductase, dissimilatory-type alpha subunit; KEGG: dvl:Dvul_2532 sulfite reductase, dissimilatory-type subunit alpha; PFAM: Nitrite/sulphite reductase 4Fe-4S region.
 
 
 0.990
Dde_2265
TIGRFAM: Sulphate adenylyltransferase; KEGG: dvm:DvMF_0074 sulfate adenylyltransferase; PFAM: Sulphate adenylyltransferase.
 
 
 0.989
Dde_0527
TIGRFAM: Sulphite reductase, dissimilatory-type beta subunit; KEGG: dvl:Dvul_2531 sulfite reductase, dissimilatory-type subunit beta; PFAM: Nitrite/sulphite reductase 4Fe-4S region; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like.
 
 
 0.985
Dde_2390
PFAM: Nitrite/sulphite reductase 4Fe-4S region; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvm:DvMF_0885 nitrite and sulphite reductase 4Fe-4S region.
 
 
 0.919
Dde_1789
PFAM: Phosphoadenosine phosphosulphate reductase; KEGG: dvm:DvMF_0181 phosphoadenosine phosphosulfate reductase.
    
 0.905
cysQ
3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
     
  0.900
Dde_3164
PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; KEGG: dvu:DVU0506 DHH family protein.
     
  0.900
Dde_1112
Quinone-interacting membrane-bound oxidoreductase; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: dvm:DvMF_2895 methyl-viologen-reducing hydrogenase delta subunit.
 
  
 0.892
Dde_1111
Quinone-interacting membrane-bound oxidoreductase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: dvl:Dvul_2135 FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
  
 0.877
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.