STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dfxDesulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity (By similarity). (126 aa)    
Predicted Functional Partners:
Dde_3194
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: dvm:DvMF_2480 rubredoxin-type Fe(Cys)4 protein.
  
  
 0.933
Dde_3195
PFAM: Flavodoxin/nitric oxide synthase; KEGG: dvm:DvMF_2479 beta-lactamase domain protein.
  
 0.883
Dde_1791
Ferroxidase; Iron-storage protein.
 
  
 0.869
Dde_2749
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: dat:HRM2_41980 Hbr3.
  
  
 0.774
Dde_1689
KEGG: dvl:Dvul_1654 OmpA/MotB domain-containing protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SMART: von Willebrand factor, type A.
   
    0.619
Dde_2560
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.610
Dde_1222
PFAM: Rubrerythrin; KEGG: dvm:DvMF_2367 rubrerythrin.
 
  
 0.607
Dde_0125
KEGG: dvl:Dvul_0200 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein.
   
    0.512
Dde_1490
PFAM: Divalent ion tolerance protein, CutA1; KEGG: dvm:DvMF_2936 CutA1 divalent ion tolerance protein.
   
    0.506
Dde_0774
KEGG: dvm:DvMF_2860 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
   
    0.491
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.