STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT12039.1Chemotaxis MotB protein; COG1360 Flagellar motor protein. (226 aa)    
Predicted Functional Partners:
EAT12038.1
Chemotaxis MotA protein; COG1291 Flagellar motor component.
 
 0.996
EAT12037.1
Hypothetical protein; COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein.
 
  
 0.993
EAT12579.1
COG1291 Flagellar motor component.
 
 0.985
PomA
COG1291 Flagellar motor component.
 
 0.982
EAT12580.1
Chemotaxis protein MotB; COG1360 Flagellar motor protein.
  
  
  0.969
MotA
COG1291 Flagellar motor component.
  
 0.933
EAT12315.1
COG1360 Flagellar motor protein.
  
  
 
0.927
MotB
Motility protein, MotA family protein; COG1360 Flagellar motor protein.
     
 0.903
FlgC
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.857
FliI
Flagellum-specific ATP synthase; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
 
  
 0.840
Your Current Organism:
Bermanella marisrubri
NCBI taxonomy Id: 207949
Other names: B. marisrubri, Bermanella marisrubri Pinhassi et al. 2009, CCUG 52064, CECT 7074, Oceanobacter sp. RED65, strain RED65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.