rpmH protein (Bermanella marisrubri) - STRING interaction network

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Score

rpmH

COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa)

Predicted Functional Partners:

rpmB

0.993

rplU

0.992

rpsT

0.992

rpsP

0.991

rnpA

0.991

rpmF

0.990

RplM

0.989

rpsU

0.986

rpsO

0.985

rpmI

0.985

Your Current Organism:

Bermanella marisrubri

NCBI taxonomy Id: 207949
Other names: B. marisrubri, Bermanella marisrubri Pinhassi et al. 2009, CCUG 52064, CECT 7074, Oceanobacter sp. RED65, strain RED65

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RplM	rnpA	RED65_05129	RED65_08549	COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.796
RplM	rplU	RED65_05129	RED65_04640	COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.995
RplM	rpmB	RED65_05129	RED65_15177	COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.994
RplM	rpmF	RED65_05129	RED65_01160	COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.994
RplM	rpmH	RED65_05129	RED65_08554	COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.989
RplM	rpmI	RED65_05129	RED65_10384	COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.994
RplM	rpsO	RED65_05129	RED65_04725	COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.997
RplM	rpsP	RED65_05129	RED65_05109	COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.997
RplM	rpsT	RED65_05129	RED65_07984	COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.995
RplM	rpsU	RED65_05129	RED65_11989	COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.993
rnpA	RplM	RED65_08549	RED65_05129	Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	0.796
rnpA	rplU	RED65_08549	RED65_04640	Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.821
rnpA	rpmB	RED65_08549	RED65_15177	Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.789
rnpA	rpmH	RED65_08549	RED65_08554	Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.991
rnpA	rpmI	RED65_08549	RED65_10384	Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.453
rnpA	rpsO	RED65_08549	RED65_04725	Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.400
rnpA	rpsP	RED65_08549	RED65_05109	Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.765
rnpA	rpsT	RED65_08549	RED65_07984	Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.841
rnpA	rpsU	RED65_08549	RED65_11989	Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.785
rplU	RplM	RED65_04640	RED65_05129	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	0.995