STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR60411.1COG2766 Putative Ser protein kinase. (640 aa)    
Predicted Functional Partners:
EAR60409.1
Hypothetical UPF0229 protein.
  
 0.997
EAR60408.1
Hypothetical protein.
 
  
 0.992
EAR60166.1
COG0656 Aldo/keto reductases, related to diketogulonate reductase.
   
    0.725
EAR60415.1
Hypothetical protein; COG0334 Glutamate dehydrogenase/leucine dehydrogenase.
  
    0.648
EAR61245.1
Flavodoxin/nitric oxide synthase; COG0655 Multimeric flavodoxin WrbA.
   
    0.583
EAR59792.1
Hypothetical protein; COG3001 Fructosamine-3-kinase.
   
    0.562
EAR60957.1
PhoH-like protein; COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH.
   
  
 0.526
EAR62285.1
Organic hydroperoxide resistance protein; COG1764 Predicted redox protein, regulator of disulfide bond formation.
   
    0.483
rpoS
RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.
  
  
 0.478
EAR60412.1
Dihydrolipoamide acetyltransferase; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
  
    0.474
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.