STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yoxAPutative epimerase. (318 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 0.991
bgaC
Beta-galactosidase.
  
 
 0.934
ganA
Arabinogalactan type I oligomer exo-hydrolase; Beta-galactosidase, lactase.
  
 
 0.916
galM2
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
 
0.912
glcK
Glucose kinase.
  
 
 0.908
galM1
Aldose 1-epimerase.
  
  
 
0.908
galT
Galactose-1-phosphate uridylyltransferase.
 
  
 0.776
galR
Galactose operon transcriptional regulator, LacI family.
 
   
 0.767
galE2
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.648
lacD
Tagatose 1,6-diphosphate aldolase; Belongs to the aldolase LacD family.
  
  
 0.454
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.