STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cueRCueR; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. (132 aa)    
Predicted Functional Partners:
pcoB
Copper resistance protein B precursor; Product name confidence: Class 2 (High similarity to functionally studied protein).
  
  
 0.906
pcoA
Copper resistance protein A precursor; Product name confidence: Class 2 (High similarity to functionally studied protein).
  
  
 0.902
PA3520
Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences).
 
  
 0.865
arsR
ArsR protein; Product name confidence: Class 1 (Function experimentally demonstrated in P. aeruginosa).
      
 0.782
oprC
Putative copper transport outer membrane porin OprC precursor; Product name confidence: Class 1 (Function experimentally demonstrated in P. aeruginosa).
      
 0.767
PA2107
Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences).
      
 0.700
PA3515
Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences).
      
 0.700
PA3518
Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences).
      
 0.699
PA3789
Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences).
      
 0.699
azu
Azurin precursor; Transfers electrons from cytochrome c551 to cytochrome oxidase.
   
  
 0.699
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 208964
Other names: P. aeruginosa PAO1, Pseudomonas aeruginosa PAO1, Pseudomonas sp. PAO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.