STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTHT_0025640Uncharacterized protein. (364 aa)    
Predicted Functional Partners:
CTHT_0005070
40S ribosomal protein s23-like protein; Belongs to the universal ribosomal protein uS12 family.
    
   0.800
CTHT_0005340
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.800
CTHT_0005360
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
   0.800
CTHT_0005890
WD_REPEATS_REGION domain-containing protein.
    
   0.800
CTHT_0006520
Nop domain-containing protein.
    
   0.800
CTHT_0000890
Utp12 domain-containing protein.
    
   0.800
CTHT_0002210
WD_REPEATS_REGION domain-containing protein.
    
   0.800
CTHT_0003370
CBF domain-containing protein.
    
   0.800
CTHT_0003430
WD_REPEATS_REGION domain-containing protein.
    
   0.800
CTHT_0003530
40S ribosomal protein S13-like protein; Belongs to the universal ribosomal protein uS15 family.
    
   0.800
Your Current Organism:
Chaetomium thermophilum
NCBI taxonomy Id: 759272
Other names: C. thermophilum var. thermophilum DSM 1495, Chaetomium thermophilum var. thermophilum DSM 1495
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