STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTHT_0051220Uncharacterized protein. (322 aa)    
Predicted Functional Partners:
CTHT_0002210
WD_REPEATS_REGION domain-containing protein.
   
 0.999
CTHT_0016900
U3 small nucleolar RNA-associated protein 22.
   
 0.999
CTHT_0030650
Bms1-type G domain-containing protein.
   
 0.999
CTHT_0026810
Uncharacterized protein.
   
 0.999
CTHT_0054250
WD_REPEATS_REGION domain-containing protein.
   
 0.999
CTHT_0003430
WD_REPEATS_REGION domain-containing protein.
   
 0.998
CTHT_0039040
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.998
CTHT_0024640
BP28CT domain-containing protein.
   
 0.998
CTHT_0037800
Putative U3 snoRNP protein.
   
 0.998
CTHT_0058290
WD_REPEATS_REGION domain-containing protein.
   
 0.998
Your Current Organism:
Chaetomium thermophilum
NCBI taxonomy Id: 759272
Other names: C. thermophilum var. thermophilum DSM 1495, Chaetomium thermophilum var. thermophilum DSM 1495
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