Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTHT_0010500 | CTHT_0012510 | G0S0M1 | G0S166 | Formyltetrahydrofolate deformylase-like protein. | Malate synthase; Belongs to the malate synthase family. | 0.800 |
CTHT_0010500 | CTHT_0012530 | G0S0M1 | G0S168 | Formyltetrahydrofolate deformylase-like protein. | Fumarate hydratase-like protein. | 0.822 |
CTHT_0010500 | CTHT_0032190 | G0S0M1 | G0S4Z3 | Formyltetrahydrofolate deformylase-like protein. | Malate dehydrogenase. | 0.817 |
CTHT_0010500 | CTHT_0044390 | G0S0M1 | G0S935 | Formyltetrahydrofolate deformylase-like protein. | Phosphoenolpyruvate carboxykinase-like protein. | 0.800 |
CTHT_0010500 | CTHT_0048880 | G0S0M1 | G0SB48 | Formyltetrahydrofolate deformylase-like protein. | Formamidase-like protein. | 0.800 |
CTHT_0010500 | CTHT_0062150 | G0S0M1 | G0SE23 | Formyltetrahydrofolate deformylase-like protein. | Malic enzyme-like protein. | 0.816 |
CTHT_0010500 | CTHT_0070260 | G0S0M1 | G0SHJ7 | Formyltetrahydrofolate deformylase-like protein. | Malate dehydrogenase. | 0.817 |
CTHT_0010500 | CTHT_0073000 | G0S0M1 | G0SHQ5 | Formyltetrahydrofolate deformylase-like protein. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.800 |
CTHT_0010500 | FDH | G0S0M1 | G0SGU4 | Formyltetrahydrofolate deformylase-like protein. | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. | 0.902 |
CTHT_0012510 | CTHT_0010500 | G0S166 | G0S0M1 | Malate synthase; Belongs to the malate synthase family. | Formyltetrahydrofolate deformylase-like protein. | 0.800 |
CTHT_0012510 | CTHT_0012530 | G0S166 | G0S168 | Malate synthase; Belongs to the malate synthase family. | Fumarate hydratase-like protein. | 0.963 |
CTHT_0012510 | CTHT_0032190 | G0S166 | G0S4Z3 | Malate synthase; Belongs to the malate synthase family. | Malate dehydrogenase. | 0.973 |
CTHT_0012510 | CTHT_0044390 | G0S166 | G0S935 | Malate synthase; Belongs to the malate synthase family. | Phosphoenolpyruvate carboxykinase-like protein. | 0.906 |
CTHT_0012510 | CTHT_0048880 | G0S166 | G0SB48 | Malate synthase; Belongs to the malate synthase family. | Formamidase-like protein. | 0.816 |
CTHT_0012510 | CTHT_0062150 | G0S166 | G0SE23 | Malate synthase; Belongs to the malate synthase family. | Malic enzyme-like protein. | 0.978 |
CTHT_0012510 | CTHT_0070260 | G0S166 | G0SHJ7 | Malate synthase; Belongs to the malate synthase family. | Malate dehydrogenase. | 0.973 |
CTHT_0012510 | CTHT_0073000 | G0S166 | G0SHQ5 | Malate synthase; Belongs to the malate synthase family. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.882 |
CTHT_0012510 | FDH | G0S166 | G0SGU4 | Malate synthase; Belongs to the malate synthase family. | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. | 0.855 |
CTHT_0012530 | CTHT_0010500 | G0S168 | G0S0M1 | Fumarate hydratase-like protein. | Formyltetrahydrofolate deformylase-like protein. | 0.822 |
CTHT_0012530 | CTHT_0012510 | G0S168 | G0S166 | Fumarate hydratase-like protein. | Malate synthase; Belongs to the malate synthase family. | 0.963 |
page 1 of 5