Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTHT_0012550 | CTHT_0017120 | G0S170 | G0S2G2 | SMC_N domain-containing protein. | SMC hinge domain-containing protein. | 0.602 |
CTHT_0012550 | CTHT_0025040 | G0S170 | G0S5P9 | SMC_N domain-containing protein. | Uncharacterized protein. | 0.739 |
CTHT_0012550 | CTHT_0026200 | G0S170 | G0S6B9 | SMC_N domain-containing protein. | Structural maintenance of chromosomes protein. | 0.881 |
CTHT_0012550 | CTHT_0033000 | G0S170 | G0S5H7 | SMC_N domain-containing protein. | Structural maintenance of chromosomes protein. | 0.536 |
CTHT_0012550 | CTHT_0043700 | G0S170 | G0S8W8 | SMC_N domain-containing protein. | Uncharacterized protein. | 0.455 |
CTHT_0012550 | CTHT_0049230 | G0S170 | G0SB82 | SMC_N domain-containing protein. | Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. | 0.828 |
CTHT_0012550 | CTHT_0053810 | G0S170 | G0SBJ6 | SMC_N domain-containing protein. | Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. | 0.870 |
CTHT_0012550 | CTHT_0066330 | G0S170 | G0SGH3 | SMC_N domain-containing protein. | Structural maintenance of chromosomes protein. | 0.739 |
CTHT_0012550 | CTHT_0070310 | G0S170 | G0SHK2 | SMC_N domain-containing protein. | Condensin complex subunit 3-like protein. | 0.832 |
CTHT_0017120 | CTHT_0012550 | G0S2G2 | G0S170 | SMC hinge domain-containing protein. | SMC_N domain-containing protein. | 0.602 |
CTHT_0017120 | CTHT_0025040 | G0S2G2 | G0S5P9 | SMC hinge domain-containing protein. | Uncharacterized protein. | 0.522 |
CTHT_0017120 | CTHT_0026200 | G0S2G2 | G0S6B9 | SMC hinge domain-containing protein. | Structural maintenance of chromosomes protein. | 0.700 |
CTHT_0017120 | CTHT_0033000 | G0S2G2 | G0S5H7 | SMC hinge domain-containing protein. | Structural maintenance of chromosomes protein. | 0.999 |
CTHT_0017120 | CTHT_0043700 | G0S2G2 | G0S8W8 | SMC hinge domain-containing protein. | Uncharacterized protein. | 0.790 |
CTHT_0017120 | CTHT_0049230 | G0S2G2 | G0SB82 | SMC hinge domain-containing protein. | Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. | 0.999 |
CTHT_0017120 | CTHT_0053810 | G0S2G2 | G0SBJ6 | SMC hinge domain-containing protein. | Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. | 0.999 |
CTHT_0017120 | CTHT_0066330 | G0S2G2 | G0SGH3 | SMC hinge domain-containing protein. | Structural maintenance of chromosomes protein. | 0.522 |
CTHT_0017120 | CTHT_0070310 | G0S2G2 | G0SHK2 | SMC hinge domain-containing protein. | Condensin complex subunit 3-like protein. | 0.999 |
CTHT_0017120 | CTHT_0073770 | G0S2G2 | G0SHY0 | SMC hinge domain-containing protein. | Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.804 |
CTHT_0025040 | CTHT_0012550 | G0S5P9 | G0S170 | Uncharacterized protein. | SMC_N domain-containing protein. | 0.739 |
page 1 of 5