Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| def | tlyC | MARG145_0720 | MARG145_0721 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | COG1253 Hemolysins and related proteins containing CBS domains [General function prediction only]. | 0.584 |
| def | tnpA1-4 | MARG145_0720 | MARG145_0723 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | COG2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair]. | 0.415 |
| def | tnpA3-4 | MARG145_0720 | MARG145_0722 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | COG2963 Transposase and inactivated derivatives [DNA replication, recombination, and repair]. | 0.415 |
| tlyC | def | MARG145_0721 | MARG145_0720 | COG1253 Hemolysins and related proteins containing CBS domains [General function prediction only]. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.584 |
| tlyC | tnpA1-4 | MARG145_0721 | MARG145_0723 | COG1253 Hemolysins and related proteins containing CBS domains [General function prediction only]. | COG2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair]. | 0.572 |
| tlyC | tnpA3-4 | MARG145_0721 | MARG145_0722 | COG1253 Hemolysins and related proteins containing CBS domains [General function prediction only]. | COG2963 Transposase and inactivated derivatives [DNA replication, recombination, and repair]. | 0.572 |
| tnpA1-4 | def | MARG145_0723 | MARG145_0720 | COG2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair]. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.415 |
| tnpA1-4 | tlyC | MARG145_0723 | MARG145_0721 | COG2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair]. | COG1253 Hemolysins and related proteins containing CBS domains [General function prediction only]. | 0.572 |
| tnpA1-4 | tnpA3-4 | MARG145_0723 | MARG145_0722 | COG2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair]. | COG2963 Transposase and inactivated derivatives [DNA replication, recombination, and repair]. | 0.790 |
| tnpA3-4 | def | MARG145_0722 | MARG145_0720 | COG2963 Transposase and inactivated derivatives [DNA replication, recombination, and repair]. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.415 |
| tnpA3-4 | tlyC | MARG145_0722 | MARG145_0721 | COG2963 Transposase and inactivated derivatives [DNA replication, recombination, and repair]. | COG1253 Hemolysins and related proteins containing CBS domains [General function prediction only]. | 0.572 |
| tnpA3-4 | tnpA1-4 | MARG145_0722 | MARG145_0723 | COG2963 Transposase and inactivated derivatives [DNA replication, recombination, and repair]. | COG2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair]. | 0.790 |