STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDA42649.1Glycosyltransferase involved in cell wall bisynthesis. (317 aa)    
Predicted Functional Partners:
SDA42426.1
Undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.623
SDA44019.1
UDP-glucuronate 4-epimerase.
 
 
  0.575
SDA37306.1
4-amino-4-deoxy-L-arabinose transferase.
 
 
  0.535
SDA37309.1
4-amino-4-deoxy-L-arabinose transferase.
 
 
  0.529
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
 
 0.498
SDA43580.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
 
 
 0.455
SDA42509.1
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
 0.426
SDA42640.1
Haloacid dehalogenase-like hydrolase.
  
    0.418
Your Current Organism:
Allisonella histaminiformans
NCBI taxonomy Id: 209880
Other names: A. histaminiformans, ATCC BAA-610, Allisonella histaminiformans Garner et al. 2003, CCUG 48567, DSM 15230, strain MR2
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