STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMU_1119cPutative sugar ABC transporter, permease protein; Best Blastp Hit: pir||E70009 conserved hypothetical protein yufP - Bacillus subtilis >gi|1934813|emb|CAB07938.1| (Z93937) unknown [Bacillus subtilis] >gi|2635652|emb|CAB15145.1| (Z99120) similar to hypothetical proteins [Bacillus subtilis]; Belongs to the binding-protein-dependent transport system permease family. (358 aa)    
Predicted Functional Partners:
SMU_1118c
Putative ABC sugar transporter, permease protein; Best Blastp Hit: pir||F70009 conserved hypothetical protein yufQ - Bacillus subtilis >gi|1934814|emb|CAB07939.1| (Z93937) unknown## [Bacillus subtilis] >gi|2635653|emb|CAB15146.1| (Z99120) similar to hypothetical proteins [Bacillus subtilis]; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
SMU_1120
Putative sugar ABC transporter, ATP-binding protein; Best Blastp Hit: pir||D70009 probable ABC transporter yufO - Bacillus subtilis >gi|1934812|emb|CAB07937.1| (Z93937) unknown [Bacillus subtilis] >gi|2635651|emb|CAB15144.1| (Z99120) similar to ABC transporter (ATP-binding protein) [Bacillus subtilis].
 
 
 0.999
SMU_1121c
Putative ABC transporter; Best Blastp Hit: sp|O05252|YUFN_BACSU HYPOTHETICAL LIPOPROTEIN YUFN PRECURSOR >gi|7429430|pir||C70009 ABC transporter (lipoprotein) homolog yufN - Bacillus subtilis >gi|1934811|emb|CAB07936.1| (Z93937) unknown [Bacillus subtilis] >gi|2635650|emb|CAB15143.1| (Z99120) similar to ABC transporter (lipoprotein) [Bacillus subtilis].
 
 
 0.998
deoC
Putative deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
  
 0.809
cdd
Putative cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
 0.807
pdp
Putative pyrimidine-nucleoside phosphorylase; Best Blastp Hit: pdb|1BRW|B Chain B, The Crystal Structure Of Pyrimidine Nucleoside Phosphorylase In A Closed Conformation >gi|6729724|pdb|1BRW|A Chain A, The Crystal Structure Of Pyrimidine Nucleoside Phosphorylase In A Closed Conformation.
  
  
 0.784
naoX
Best Blastp Hit: pir||JC4541 NADH oxidase (H2O-forming) (EC 1.6.-.-) - Streptococcus mutans >gi|1199958|dbj|BAA08707.1| (D49951) H2O-forming NADH Oxidase [Streptococcus mutans] >gi|1586930|prf||2205240A H2O-forming NADH oxidase [Streptococcus mutans].
       0.496
Your Current Organism:
Streptococcus mutans
NCBI taxonomy Id: 210007
Other names: S. mutans UA159, Streptococcus mutans UA159, Streptococcus mutans str. UA159
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