STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMU_1415cBest Blastp Hit: pir||H70023 N-acetyl-glucosamine catabolism homolog yutF - Bacillus subtilis >gi|2635726|emb|CAB15219.1| (Z99120) similar to N-acetyl-glucosamine catabolism [Bacillus subtilis]. (257 aa)    
Predicted Functional Partners:
SMU_1414c
Conserved hypothetical protein.
  
    0.859
SMU_1416c
Best Blastp Hit: dbj|BAB06808.1| (AP001517) mutator MutT protein [Bacillus halodurans].
       0.777
hemN
Putative coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.730
SMU_1417c
Best Blastp Hit: sp|Q42712|FATA_CORSA OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE PRECURSOR (18:0-ACYL-CARRIER PROTEIN THIOESTERASE) (18:0-ACP THIOESTERASE) (ACYL-[ACYL-CARRIER PROTEIN] HYDROLASE) >gi|511497|gb|AAA19864.1| (L20978) oleoyl-acyl carrier protein thioesterase [Coriandrum sativum].
       0.728
SMU_1412c
Best Blastp Hit: gb|AAD09219.1| (U73183) ABC transporter membrane protein subunit [Streptococcus mutans].
  
    0.543
SMU_521
Conserved hypothetical protein; Best Blastp Hit: dbj|BAB07152.1| (AP001518) unknown conserved protein in B. subtilis [Bacillus halodurans].
 
  
 0.514
Your Current Organism:
Streptococcus mutans
NCBI taxonomy Id: 210007
Other names: S. mutans UA159, Streptococcus mutans UA159, Streptococcus mutans str. UA159
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