Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMU_1453c | SMU_1454c | SMU_1453c | SMU_1454c | Conserved hypothetical protein; Best Blastp Hit: gb|AAA25160.1| (L16975) ORF1 [Lactococcus lactis]. | Putative membrane protein; Best Blastp Hit: gb|AAD00285.1| (U78604) putative membrane protein [Streptococcus mutans]. | 0.497 |
SMU_1453c | mutX | SMU_1453c | SMU_1455 | Conserved hypothetical protein; Best Blastp Hit: gb|AAA25160.1| (L16975) ORF1 [Lactococcus lactis]. | Mutator protein, pyrophosphohydrolase; Involved in the DNA repair system to avoid A.T to G.C transversions. Degrades 8-oxo-dGTP to the monophosphate, but is also active on all of the nucleoside triphosphates (By similarity). Belongs to the Nudix hydrolase family. | 0.419 |
SMU_1454c | SMU_1453c | SMU_1454c | SMU_1453c | Putative membrane protein; Best Blastp Hit: gb|AAD00285.1| (U78604) putative membrane protein [Streptococcus mutans]. | Conserved hypothetical protein; Best Blastp Hit: gb|AAA25160.1| (L16975) ORF1 [Lactococcus lactis]. | 0.497 |
SMU_1454c | SMU_1456c | SMU_1454c | SMU_1456c | Putative membrane protein; Best Blastp Hit: gb|AAD00285.1| (U78604) putative membrane protein [Streptococcus mutans]. | Hypothetical protein. | 0.578 |
SMU_1454c | mutX | SMU_1454c | SMU_1455 | Putative membrane protein; Best Blastp Hit: gb|AAD00285.1| (U78604) putative membrane protein [Streptococcus mutans]. | Mutator protein, pyrophosphohydrolase; Involved in the DNA repair system to avoid A.T to G.C transversions. Degrades 8-oxo-dGTP to the monophosphate, but is also active on all of the nucleoside triphosphates (By similarity). Belongs to the Nudix hydrolase family. | 0.629 |
SMU_1456c | SMU_1454c | SMU_1456c | SMU_1454c | Hypothetical protein. | Putative membrane protein; Best Blastp Hit: gb|AAD00285.1| (U78604) putative membrane protein [Streptococcus mutans]. | 0.578 |
SMU_1456c | mutX | SMU_1456c | SMU_1455 | Hypothetical protein. | Mutator protein, pyrophosphohydrolase; Involved in the DNA repair system to avoid A.T to G.C transversions. Degrades 8-oxo-dGTP to the monophosphate, but is also active on all of the nucleoside triphosphates (By similarity). Belongs to the Nudix hydrolase family. | 0.773 |
SMU_1456c | rmlB | SMU_1456c | SMU_1457 | Hypothetical protein. | Putative dTDP-glucose-4,6-dehydratase; Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6- deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction. | 0.463 |
mutX | SMU_1453c | SMU_1455 | SMU_1453c | Mutator protein, pyrophosphohydrolase; Involved in the DNA repair system to avoid A.T to G.C transversions. Degrades 8-oxo-dGTP to the monophosphate, but is also active on all of the nucleoside triphosphates (By similarity). Belongs to the Nudix hydrolase family. | Conserved hypothetical protein; Best Blastp Hit: gb|AAA25160.1| (L16975) ORF1 [Lactococcus lactis]. | 0.419 |
mutX | SMU_1454c | SMU_1455 | SMU_1454c | Mutator protein, pyrophosphohydrolase; Involved in the DNA repair system to avoid A.T to G.C transversions. Degrades 8-oxo-dGTP to the monophosphate, but is also active on all of the nucleoside triphosphates (By similarity). Belongs to the Nudix hydrolase family. | Putative membrane protein; Best Blastp Hit: gb|AAD00285.1| (U78604) putative membrane protein [Streptococcus mutans]. | 0.629 |
mutX | SMU_1456c | SMU_1455 | SMU_1456c | Mutator protein, pyrophosphohydrolase; Involved in the DNA repair system to avoid A.T to G.C transversions. Degrades 8-oxo-dGTP to the monophosphate, but is also active on all of the nucleoside triphosphates (By similarity). Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.773 |
mutX | rmlB | SMU_1455 | SMU_1457 | Mutator protein, pyrophosphohydrolase; Involved in the DNA repair system to avoid A.T to G.C transversions. Degrades 8-oxo-dGTP to the monophosphate, but is also active on all of the nucleoside triphosphates (By similarity). Belongs to the Nudix hydrolase family. | Putative dTDP-glucose-4,6-dehydratase; Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6- deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction. | 0.939 |
rmlB | SMU_1456c | SMU_1457 | SMU_1456c | Putative dTDP-glucose-4,6-dehydratase; Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6- deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction. | Hypothetical protein. | 0.463 |
rmlB | mutX | SMU_1457 | SMU_1455 | Putative dTDP-glucose-4,6-dehydratase; Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6- deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction. | Mutator protein, pyrophosphohydrolase; Involved in the DNA repair system to avoid A.T to G.C transversions. Degrades 8-oxo-dGTP to the monophosphate, but is also active on all of the nucleoside triphosphates (By similarity). Belongs to the Nudix hydrolase family. | 0.939 |