STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmlAPutative glucose-1-phosphate thymidyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. (289 aa)    
Predicted Functional Partners:
rmlB
Putative dTDP-glucose-4,6-dehydratase; Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6- deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction.
 
 
 0.999
rmlC
Best Blastp Hit: dbj|BAA11248.1| (D78182) dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans].
 
  
 0.997
SMU_824
dTDP-4-keto-L-rhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.979
SMU_322c
Best Blastp Hit: dbj|BAA28714.1| (AB001562) glucose-1-phosphate uridylyltransferase [Streptococcus mutans].
  
 
0.932
pgm
Putative phosphoglucomutase; Best Blastp Hit: emb|CAB96418.1| (AJ243290) phosphoglucomutase [Streptococcus thermophilus].
  
 
 0.923
rgpC
Putative polysaccharide ABC transporter, permease protein; Best Blastp Hit: pir||T00088 ABC-type transport protein rgpCc - Streptococcus mutans >gi|3399706|dbj|BAA32091.1| (AB010970) ABC-transporter [Streptococcus mutans].
  
  
 0.824
rgpA
Putative RgpAc; Best Blastp Hit: pir||T00086 rgpAc protein - Streptococcus mutans >gi|3399704|dbj|BAA32089.1| (AB010970) rgpAc [Streptococcus mutans].
 
  
 0.819
rgpF
RgpFc protein; Best Blastp Hit: pir||T00091 rgpFc protein - Streptococcus mutans >gi|3399709|dbj|BAA32094.1| (AB010970) rgpFc [Streptococcus mutans].
  
  
 0.806
rgpB
Rhamnosyltransferase; Best Blastp Hit: pir||T00087 rhamnosyltransferase - Streptococcus mutans >gi|3399705|dbj|BAA32090.1| (AB010970) rhamnosyltransferase [Streptococcus mutans].
 
  
 0.805
rgpG
Putative glycosyl transferase N-acetylglucosaminyltransferase), RgpG; Best Blastp Hit: dbj|BAA82114.1| (AB022909) RgpG [Streptococcus mutans].
  
  
 0.755
Your Current Organism:
Streptococcus mutans
NCBI taxonomy Id: 210007
Other names: S. mutans UA159, Streptococcus mutans UA159, Streptococcus mutans str. UA159
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