STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copACopper-transporting ATPase; Best Blastp Hit: gb|AAG10086.1|AF296446_2 (AF296446) CopA [Streptococcus mutans]. (742 aa)    
Predicted Functional Partners:
copZ
Putative copper chaperone; Best Blastp Hit: gb|AAG10087.1|AF296446_3 (AF296446) CopZ [Streptococcus mutans].
  
 
 0.956
copY
Negative transcriptional regulator, CopY; Best Blastp Hit: gb|AAG10085.1|AF296446_1 (AF296446) CopY [Streptococcus mutans].
  
  
 0.848
SMU_428
Conserved hypothetical protein; Best Blastp Hit: emb|CAB94816.1| (AJ245582) hypothetical protein [Streptococcus thermophilus].
       0.485
adcA
Putative surface adhesin; Best Blastp Hit: emb|CAA96185.1| (Z71552) AdcA protein [Streptococcus pneumoniae]; Belongs to the bacterial solute-binding protein 9 family.
     
 0.417
Your Current Organism:
Streptococcus mutans
NCBI taxonomy Id: 210007
Other names: S. mutans UA159, Streptococcus mutans UA159, Streptococcus mutans str. UA159
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