STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMU_586Conserved hypothetical protein; Best Blastp Hit: dbj|BAB07346.1| (AP001519) unknown conserved protein [Bacillus halodurans]. (279 aa)    
Predicted Functional Partners:
SMU_229
Best Blastp Hit: pir||E69879 conserved hypothetical protein yloV - Bacillus subtilis >gi|2337813|emb|CAA74257.1| (Y13937) YloV protein [Bacillus subtilis] >gi|2633956|emb|CAB13457.1| (Z99112) similar to hypothetical proteins [Bacillus subtilis].
   0.990
SMU_588
Conserved hypothetical protein; Best Blastp Hit: emb|CAA72097.1| (Y11213) hypothetical protein [Streptococcus thermophilus].
  
  
 0.816
SMU_587
Conserved hypothetical protein; Best Blastp Hit: emb|CAA72096.1| (Y11213) hypothetical protein [Streptococcus thermophilus].
  
  
 0.809
SMU_228
Best Blastp Hit: pir||D69879 alkaline-shock protein homolog yloU - Bacillus subtilis >gi|2337812|emb|CAA74256.1| (Y13937) putative Asp23 protein [Bacillus subtilis] >gi|2633955|emb|CAB13456.1| (Z99112) similar to alkaline-shock protein [Bacillus subtilis].
 
    0.617
hup
Putative DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. Seems also to act as a fortuitous virulence factor in delayed sequelae by binding to heparan sulfate-proteoglycans in the extracellular matrix of target organs and acting as a nidus for in situ immune complex formation.
     
 0.608
recN
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.502
xseA
Putative exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.483
xseB
Putative exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
       0.483
SMU_582
Putative farnesyl diphosphate synthase; Best Blastp Hit: sp|O66126|ISPA_MICLU GERANYLTRANSTRANSFERASE (FARNESYL-DIPHOSPHATE SYNTHASE) (FPP SYNTHASE) >gi|2982677|dbj|BAA25265.1| (AB003187) farnesyl diphosphate synthase [Micrococcus luteus]; Belongs to the FPP/GGPP synthase family.
       0.483
SMU_583
Putative hemolysin; Best Blastp Hit: dbj|BAB06497.1| (AP001516) hemolysin-like protein [Bacillus halodurans].
       0.483
Your Current Organism:
Streptococcus mutans
NCBI taxonomy Id: 210007
Other names: S. mutans UA159, Streptococcus mutans UA159, Streptococcus mutans str. UA159
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.