STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_27653Uncharacterized protein. (1002 aa)    
Predicted Functional Partners:
CCACVL1_11847
Uncharacterized protein.
   
 0.667
CCACVL1_29270
Adenylate kinase.
   
 
 0.433
CCACVL1_24152
Adenylate kinase; Belongs to the adenylate kinase family.
   
 
 0.433
CCACVL1_23017
Adenylate kinase; Belongs to the adenylate kinase family.
   
 
 0.433
CCACVL1_21455
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
   
 
 0.433
CCACVL1_19504
Adenylate kinase; Belongs to the adenylate kinase family.
   
 
 0.433
CCACVL1_17682
Adenylate kinase; Belongs to the adenylate kinase family.
   
 
 0.433
CCACVL1_17182
Adenylate kinase; Belongs to the adenylate kinase family.
   
 
 0.433
CCACVL1_11029
Adenylate kinase.
   
 
 0.433
CCACVL1_11033
Adenylate kinase; Belongs to the adenylate kinase family.
   
 
 0.433
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.