STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_13972Uncharacterized protein. (175 aa)    
Predicted Functional Partners:
CCACVL1_04027
Haloacid dehalogenase/epoxide hydrolase.
   
  0.917
CCACVL1_30993
Heat shock protein 70 family.
   
 0.813
CCACVL1_08187
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
   0.655
CCACVL1_26619
Chaperone DnaK; Belongs to the heat shock protein 70 family.
   
 0.643
CCACVL1_22997
Chaperone DnaK; Belongs to the heat shock protein 70 family.
   
 0.643
CCACVL1_28036
Heat shock protein 70 family.
   
 0.637
CCACVL1_15425
Heat shock protein 70 family.
   
 0.637
CCACVL1_23451
Heat shock protein 70 family; Belongs to the heat shock protein 70 family.
   
 0.630
CCACVL1_13400
Heat shock protein 70 family; Belongs to the heat shock protein 70 family.
   
 0.630
CCACVL1_09508
Formin-like protein; Belongs to the formin-like family.
   
 0.630
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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