STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_12324WD_REPEATS_REGION domain-containing protein. (410 aa)    
Predicted Functional Partners:
CCACVL1_16340
Zinc finger, CCCH-type.
    
 0.976
CCACVL1_24182
DNA-binding HORMA.
   
 0.943
CCACVL1_16489
Tetratricopeptide-like helical.
   
 0.919
CCACVL1_15575
WD_REPEATS_REGION domain-containing protein.
   
 0.915
CCACVL1_30649
Anaphase-promoting complex subunit 1.
    
 0.913
CCACVL1_17083
WD_REPEATS_REGION domain-containing protein.
   
 0.913
CCACVL1_06561
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.909
CCACVL1_26157
Uncharacterized protein.
    
 0.908
CCACVL1_05387
Spindle assembly checkpoint component Mad1.
   
 0.906
CCACVL1_02384
Uncharacterized protein.
    
 0.906
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.