STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM35992.1Nitroreductase family protein. (331 aa)    
Predicted Functional Partners:
SDM35435.1
Hypothetical protein.
 
  
 0.876
SDM42687.1
Nitroreductase family protein.
 
   
0.850
SDM20243.1
Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family.
   
    0.759
SDM93040.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
    
 0.733
SDM35975.1
Phosphoenolpyruvate synthase.
       0.726
SDN16326.1
Uroporphyrinogen III methyltransferase / synthase.
  
 
 0.702
SDM60782.1
1-phosphofructokinase.
   
    0.693
SDM76515.1
Tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.693
SDM35949.1
Zn-dependent protease (includes SpoIVFB).
  
    0.602
SDM42716.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  
 0.549
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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