STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM51779.1Deazaflavin-dependent oxidoreductase, nitroreductase family. (144 aa)    
Predicted Functional Partners:
SDN44207.1
LPPG:FO 2-phospho-L-lactate transferase.
  
   
 0.781
SDN64709.1
F420-dependent oxidoreductase, CPS_4043 family.
  
  
 0.756
fbiD
2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
  
   
 0.748
SDN44189.1
Coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase.
  
   
 0.747
SDN59081.1
Alkanesulfonate monooxygenase.
  
  
 0.747
SDN29359.1
Luciferase-like monooxygenase.
  
  
 0.737
SDN68140.1
F420-dependent oxidoreductase, G6PDH family.
  
  
 0.713
SDM43313.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
  
 0.712
SDM51582.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
  
 0.647
SDN63923.1
F420-dependent oxidoreductase, G6PDH family.
  
  
 0.630
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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