STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN64020.1Haloacetate dehalogenase. (290 aa)    
Predicted Functional Partners:
SDM52959.1
Amino acid adenylation domain-containing protein.
  
 0.830
SDN57463.1
2-haloacid dehalogenase.
  
 
  0.792
SDN63957.1
Uncharacterised nucleotidyltransferase.
       0.773
SDN63981.1
BON domain-containing protein.
       0.773
SDN64005.1
Predicted phosphoesterase.
       0.773
SDN63923.1
F420-dependent oxidoreductase, G6PDH family.
  
    0.757
SDN63941.1
Hypothetical protein.
       0.757
SDN03352.1
Acyl transferase domain-containing protein.
  
 0.752
SDM49538.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.672
SDM29007.1
Phosphopantetheine attachment site.
  
  0.641
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.