STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN67781.1P-hydroxybenzoate 3-monooxygenase. (380 aa)    
Predicted Functional Partners:
SDN67800.1
Protocatechuate 3,4-dioxygenase beta subunit.
 
 
 0.986
SDN67873.1
Protocatechuate 3,4-dioxygenase alpha subunit.
 
  
 0.986
SDN67892.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
     0.941
SDN67908.1
3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
 
  
 0.934
SDM39649.1
Protocatechuate 3,4-dioxygenase beta subunit.
  
  
  0.798
SDM92002.1
Protocatechuate 3,4-dioxygenase beta subunit.
  
  
  0.621
SDN03352.1
Acyl transferase domain-containing protein.
  
 0.563
SDM45300.1
3-oxoadipate enol-lactonase.
  
    0.546
SDN67756.1
40-residue YVTN family beta-propeller repeat-containing protein.
       0.527
SDN04753.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
     0.500
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.