STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63252.1Archaeal heat shock regulator, ArsR family. (230 aa)    
Predicted Functional Partners:
AKB63253.1
Cell division protein FtsH.
     
 0.815
AKB63917.1
Hypothetical protein.
  
     0.709
AKB63219.1
Archaeosine tRNA-ribosyltransferase type 2.
  
     0.668
AKB64804.1
Hypothetical protein.
  
     0.659
AKB66452.1
Hypothetical protein.
  
     0.655
AKB65538.1
Hypothetical protein; Belongs to the UPF0212 family.
  
     0.651
AKB63254.1
Putative heat shock protein; Belongs to the small heat shock protein (HSP20) family.
 
   
 0.642
AKB65521.1
Hypothetical protein.
  
     0.642
AKB65706.1
KEOPS complex Cgi121-like subunit.
  
     0.638
mutS2
DNA mismatch repair protein; Has ATPase and non-specific DNA-binding activities. Belongs to the DNA mismatch repair MutS family. Archaeal Muts2 subfamily.
  
     0.618
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.