node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
YPO1287 | YPO1288 | YPO1287 | YPO1288 | Putative short chain oxidoreductase; Similar to Gluconobacter oxydans gluconate 5-dehydrogenase Gno SW:GNO_GLUOX (P50199) (256 aa) fasta scores: E(): 9e-27, 37.5% id in 256 aa, and to Thermotoga maritima oxidoreductase, short chain dehydrogenase/reductase family TM0297 TR:Q9WYD3 (EMBL:AE001711) (257 aa) fasta scores: E(): 5.4e-32, 48.4% id in 248 aa. | Putative D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to Streptomyces coelicolor putative dehydrogenase SCE65.14C TR:Q9RKF9 (EMBL:AL133236) (344 aa) fasta scores: E(): 0, 35.7% id in 297 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 5.7e-31,36.1% id in 291 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.813 |
YPO1287 | YPO1289 | YPO1287 | YPO1289 | Putative short chain oxidoreductase; Similar to Gluconobacter oxydans gluconate 5-dehydrogenase Gno SW:GNO_GLUOX (P50199) (256 aa) fasta scores: E(): 9e-27, 37.5% id in 256 aa, and to Thermotoga maritima oxidoreductase, short chain dehydrogenase/reductase family TM0297 TR:Q9WYD3 (EMBL:AE001711) (257 aa) fasta scores: E(): 5.4e-32, 48.4% id in 248 aa. | Similar to Streptomyces coelicolor hypothetical protein SCF41.20c TR:Q9RJU9 (EMBL:AL117387) (390 aa) fasta scores: E(): 0, 54.7% id in 380 aa. | 0.818 |
YPO1287 | nifJ | YPO1287 | YPO2334 | Putative short chain oxidoreductase; Similar to Gluconobacter oxydans gluconate 5-dehydrogenase Gno SW:GNO_GLUOX (P50199) (256 aa) fasta scores: E(): 9e-27, 37.5% id in 256 aa, and to Thermotoga maritima oxidoreductase, short chain dehydrogenase/reductase family TM0297 TR:Q9WYD3 (EMBL:AE001711) (257 aa) fasta scores: E(): 5.4e-32, 48.4% id in 248 aa. | Similar to Escherichia coli probable pyruvate-flavodoxin oxidoreductase YdbK SW:NIFJ_ECOLI (P52647) (1174 aa) fasta scores: E(): 0, 80.5% id in 1177 aa, and to Klebsiella pneumoniae pyruvate-flavodoxin oxidoreductase NifJ SW:NIFJ_KLEPN (P03833) (1171 aa) fasta scores: E(): 0, 48.0% id in 1184 aa. | 0.873 |
YPO1288 | YPO1287 | YPO1288 | YPO1287 | Putative D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to Streptomyces coelicolor putative dehydrogenase SCE65.14C TR:Q9RKF9 (EMBL:AL133236) (344 aa) fasta scores: E(): 0, 35.7% id in 297 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 5.7e-31,36.1% id in 291 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Putative short chain oxidoreductase; Similar to Gluconobacter oxydans gluconate 5-dehydrogenase Gno SW:GNO_GLUOX (P50199) (256 aa) fasta scores: E(): 9e-27, 37.5% id in 256 aa, and to Thermotoga maritima oxidoreductase, short chain dehydrogenase/reductase family TM0297 TR:Q9WYD3 (EMBL:AE001711) (257 aa) fasta scores: E(): 5.4e-32, 48.4% id in 248 aa. | 0.813 |
YPO1288 | YPO1289 | YPO1288 | YPO1289 | Putative D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to Streptomyces coelicolor putative dehydrogenase SCE65.14C TR:Q9RKF9 (EMBL:AL133236) (344 aa) fasta scores: E(): 0, 35.7% id in 297 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 5.7e-31,36.1% id in 291 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Similar to Streptomyces coelicolor hypothetical protein SCF41.20c TR:Q9RJU9 (EMBL:AL117387) (390 aa) fasta scores: E(): 0, 54.7% id in 380 aa. | 0.833 |
YPO1288 | b2066 | YPO1288 | YPO1524 | Putative D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to Streptomyces coelicolor putative dehydrogenase SCE65.14C TR:Q9RKF9 (EMBL:AL133236) (344 aa) fasta scores: E(): 0, 35.7% id in 297 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 5.7e-31,36.1% id in 291 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Uridine kinase; Similar to Escherichia coli uridine kinase SW:URK_ECOLI (P31218) (213 aa) fasta scores: E(): 0, 91.1% id in 213 aa, and to Vibrio cholerae uridine kinase vc1038 TR:Q9KT67 (EMBL:AE004185) (219 aa) fasta scores: E(): 0,75.0% id in 208 aa. | 0.777 |
YPO1288 | metL | YPO1288 | YPO0116 | Putative D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to Streptomyces coelicolor putative dehydrogenase SCE65.14C TR:Q9RKF9 (EMBL:AL133236) (344 aa) fasta scores: E(): 0, 35.7% id in 297 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 5.7e-31,36.1% id in 291 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Cystathionine gamma-synthase (pseudogene); PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.790 |
YPO1288 | nifJ | YPO1288 | YPO2334 | Putative D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to Streptomyces coelicolor putative dehydrogenase SCE65.14C TR:Q9RKF9 (EMBL:AL133236) (344 aa) fasta scores: E(): 0, 35.7% id in 297 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 5.7e-31,36.1% id in 291 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Similar to Escherichia coli probable pyruvate-flavodoxin oxidoreductase YdbK SW:NIFJ_ECOLI (P52647) (1174 aa) fasta scores: E(): 0, 80.5% id in 1177 aa, and to Klebsiella pneumoniae pyruvate-flavodoxin oxidoreductase NifJ SW:NIFJ_KLEPN (P03833) (1171 aa) fasta scores: E(): 0, 48.0% id in 1184 aa. | 0.833 |
YPO1288 | rplF | YPO1288 | YPO0224 | Putative D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to Streptomyces coelicolor putative dehydrogenase SCE65.14C TR:Q9RKF9 (EMBL:AL133236) (344 aa) fasta scores: E(): 0, 35.7% id in 297 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 5.7e-31,36.1% id in 291 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.729 |
YPO1288 | rplP | YPO1288 | YPO0217 | Putative D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to Streptomyces coelicolor putative dehydrogenase SCE65.14C TR:Q9RKF9 (EMBL:AL133236) (344 aa) fasta scores: E(): 0, 35.7% id in 297 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 5.7e-31,36.1% id in 291 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.737 |
YPO1288 | rpmA | YPO1288 | YPO3511 | Putative D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to Streptomyces coelicolor putative dehydrogenase SCE65.14C TR:Q9RKF9 (EMBL:AL133236) (344 aa) fasta scores: E(): 0, 35.7% id in 297 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 5.7e-31,36.1% id in 291 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Similar to Escherichia coli 50S ribosomal protein L27 RpmA SW:RL27_ECOLI (P02427) (84 aa) fasta scores: E(): 5e-31, 94.0% id in 84 aa, and to Vibrio cholerae ribosomal protein L27 Vc0436 TR:Q9KUS9 (EMBL:AE004131) (86 aa) fasta scores: E(): 1.2e-29, 91.6% id in 83 aa; Belongs to the bacterial ribosomal protein bL27 family. | 0.723 |
YPO1288 | serC | YPO1288 | YPO1389 | Putative D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to Streptomyces coelicolor putative dehydrogenase SCE65.14C TR:Q9RKF9 (EMBL:AL133236) (344 aa) fasta scores: E(): 0, 35.7% id in 297 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 5.7e-31,36.1% id in 291 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.920 |
YPO1288 | thrA | YPO1288 | YPO0459 | Putative D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to Streptomyces coelicolor putative dehydrogenase SCE65.14C TR:Q9RKF9 (EMBL:AL133236) (344 aa) fasta scores: E(): 0, 35.7% id in 297 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 5.7e-31,36.1% id in 291 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Similar to Escherichia coli bifunctional aspartokinase/homoserine dehydrogenase I ThrA SW:AK1H_ECOLI (P00561) (820 aa) fasta scores: E(): 0, 82.0% id in 821 aa,and to Serratia marcescens bifunctional aspartokinase/homoserine dehydrogenase I ThrA SW:AK1H_SERMA (P27725) (819 aa) fasta scores: E(): 0, 89.9% id in 819 aa; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.790 |
YPO1289 | YPO1287 | YPO1289 | YPO1287 | Similar to Streptomyces coelicolor hypothetical protein SCF41.20c TR:Q9RJU9 (EMBL:AL117387) (390 aa) fasta scores: E(): 0, 54.7% id in 380 aa. | Putative short chain oxidoreductase; Similar to Gluconobacter oxydans gluconate 5-dehydrogenase Gno SW:GNO_GLUOX (P50199) (256 aa) fasta scores: E(): 9e-27, 37.5% id in 256 aa, and to Thermotoga maritima oxidoreductase, short chain dehydrogenase/reductase family TM0297 TR:Q9WYD3 (EMBL:AE001711) (257 aa) fasta scores: E(): 5.4e-32, 48.4% id in 248 aa. | 0.818 |
YPO1289 | YPO1288 | YPO1289 | YPO1288 | Similar to Streptomyces coelicolor hypothetical protein SCF41.20c TR:Q9RJU9 (EMBL:AL117387) (390 aa) fasta scores: E(): 0, 54.7% id in 380 aa. | Putative D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to Streptomyces coelicolor putative dehydrogenase SCE65.14C TR:Q9RKF9 (EMBL:AL133236) (344 aa) fasta scores: E(): 0, 35.7% id in 297 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 5.7e-31,36.1% id in 291 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.833 |
b2066 | YPO1288 | YPO1524 | YPO1288 | Uridine kinase; Similar to Escherichia coli uridine kinase SW:URK_ECOLI (P31218) (213 aa) fasta scores: E(): 0, 91.1% id in 213 aa, and to Vibrio cholerae uridine kinase vc1038 TR:Q9KT67 (EMBL:AE004185) (219 aa) fasta scores: E(): 0,75.0% id in 208 aa. | Putative D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to Streptomyces coelicolor putative dehydrogenase SCE65.14C TR:Q9RKF9 (EMBL:AL133236) (344 aa) fasta scores: E(): 0, 35.7% id in 297 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 5.7e-31,36.1% id in 291 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.777 |
b2066 | nifJ | YPO1524 | YPO2334 | Uridine kinase; Similar to Escherichia coli uridine kinase SW:URK_ECOLI (P31218) (213 aa) fasta scores: E(): 0, 91.1% id in 213 aa, and to Vibrio cholerae uridine kinase vc1038 TR:Q9KT67 (EMBL:AE004185) (219 aa) fasta scores: E(): 0,75.0% id in 208 aa. | Similar to Escherichia coli probable pyruvate-flavodoxin oxidoreductase YdbK SW:NIFJ_ECOLI (P52647) (1174 aa) fasta scores: E(): 0, 80.5% id in 1177 aa, and to Klebsiella pneumoniae pyruvate-flavodoxin oxidoreductase NifJ SW:NIFJ_KLEPN (P03833) (1171 aa) fasta scores: E(): 0, 48.0% id in 1184 aa. | 0.485 |
metL | YPO1288 | YPO0116 | YPO1288 | Cystathionine gamma-synthase (pseudogene); PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Putative D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to Streptomyces coelicolor putative dehydrogenase SCE65.14C TR:Q9RKF9 (EMBL:AL133236) (344 aa) fasta scores: E(): 0, 35.7% id in 297 aa, and to Bacillus subtilis D-3-phosphoglycerate dehydrogenase SerA SW:SERA_BACSU (P35136) (525 aa) fasta scores: E(): 5.7e-31,36.1% id in 291 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.790 |
metL | nifJ | YPO0116 | YPO2334 | Cystathionine gamma-synthase (pseudogene); PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Similar to Escherichia coli probable pyruvate-flavodoxin oxidoreductase YdbK SW:NIFJ_ECOLI (P52647) (1174 aa) fasta scores: E(): 0, 80.5% id in 1177 aa, and to Klebsiella pneumoniae pyruvate-flavodoxin oxidoreductase NifJ SW:NIFJ_KLEPN (P03833) (1171 aa) fasta scores: E(): 0, 48.0% id in 1184 aa. | 0.674 |
metL | serC | YPO0116 | YPO1389 | Cystathionine gamma-synthase (pseudogene); PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.707 |