Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aat | aroQ | YPO1371 | YPO3660 | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Putative class II dehydroquinase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.418 |
| aat | clpS | YPO1371 | YPO1367 | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Conserved hypothetical protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.820 |
| aat | cydC | YPO1371 | YPO1372 | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Similar to Escherichia coli transport ATP-binding protein CydC SW:CYDC_ECOLI (P23886) (573 aa) fasta scores: E(): 0, 65.6% id in 572 aa, and to Shigella flexneri putative ABC transporter CydC TR:O52574 (EMBL:AF040718) (573 aa) fasta scores: E(): 0, 64.9% id in 572 aa. In E. coli, functional CydC is necessary for the formation of the cytochrome bd quinol oxidase. | 0.513 |
| aat | cydD | YPO1371 | YPO1373 | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Similar to Escherichia coli transport ATP-binding protein CydD SW:CYDD_ECOLI (P29018) (588 aa) fasta scores: E(): 0, 65.6% id in 588 aa, and to Providencia stuartii transport ATP-binding protein AarD SW:AARD_PROST (Q52402) (588 aa) fasta scores: E(): 0, 69.9% id in 588 aa. In E. coli, functional CydD is necessary for the formation of the cytochrome bd quinol oxidase. | 0.513 |
| aat | infA | YPO1371 | YPO1370 | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.635 |
| aat | tyrA | YPO1371 | YPO3285 | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Similar to Escherichia coli T-protein [includes: chorismate mutase and prephenate dehydrogenase] TyrA SW:TYRA_ECOLI (P07023) (373 aa) fasta scores: E(): 0, 86.9% id in 373 aa, and to Erwinia herbicola T-protein [includes: chorismate mutase and prephenate dehydrogenase] TyrA SW:TYRA_ERWHE (Q02287) (373 aa) fasta scores: E(): 0, 86.0% id in 372 aa. | 0.416 |
| aroQ | aat | YPO3660 | YPO1371 | Putative class II dehydroquinase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.418 |
| aroQ | tyrA | YPO3660 | YPO3285 | Putative class II dehydroquinase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | Similar to Escherichia coli T-protein [includes: chorismate mutase and prephenate dehydrogenase] TyrA SW:TYRA_ECOLI (P07023) (373 aa) fasta scores: E(): 0, 86.9% id in 373 aa, and to Erwinia herbicola T-protein [includes: chorismate mutase and prephenate dehydrogenase] TyrA SW:TYRA_ERWHE (Q02287) (373 aa) fasta scores: E(): 0, 86.0% id in 372 aa. | 0.610 |
| clpS | aat | YPO1367 | YPO1371 | Conserved hypothetical protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.820 |
| cydC | aat | YPO1372 | YPO1371 | Similar to Escherichia coli transport ATP-binding protein CydC SW:CYDC_ECOLI (P23886) (573 aa) fasta scores: E(): 0, 65.6% id in 572 aa, and to Shigella flexneri putative ABC transporter CydC TR:O52574 (EMBL:AF040718) (573 aa) fasta scores: E(): 0, 64.9% id in 572 aa. In E. coli, functional CydC is necessary for the formation of the cytochrome bd quinol oxidase. | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.513 |
| cydC | cydD | YPO1372 | YPO1373 | Similar to Escherichia coli transport ATP-binding protein CydC SW:CYDC_ECOLI (P23886) (573 aa) fasta scores: E(): 0, 65.6% id in 572 aa, and to Shigella flexneri putative ABC transporter CydC TR:O52574 (EMBL:AF040718) (573 aa) fasta scores: E(): 0, 64.9% id in 572 aa. In E. coli, functional CydC is necessary for the formation of the cytochrome bd quinol oxidase. | Similar to Escherichia coli transport ATP-binding protein CydD SW:CYDD_ECOLI (P29018) (588 aa) fasta scores: E(): 0, 65.6% id in 588 aa, and to Providencia stuartii transport ATP-binding protein AarD SW:AARD_PROST (Q52402) (588 aa) fasta scores: E(): 0, 69.9% id in 588 aa. In E. coli, functional CydD is necessary for the formation of the cytochrome bd quinol oxidase. | 0.999 |
| cydD | aat | YPO1373 | YPO1371 | Similar to Escherichia coli transport ATP-binding protein CydD SW:CYDD_ECOLI (P29018) (588 aa) fasta scores: E(): 0, 65.6% id in 588 aa, and to Providencia stuartii transport ATP-binding protein AarD SW:AARD_PROST (Q52402) (588 aa) fasta scores: E(): 0, 69.9% id in 588 aa. In E. coli, functional CydD is necessary for the formation of the cytochrome bd quinol oxidase. | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.513 |
| cydD | cydC | YPO1373 | YPO1372 | Similar to Escherichia coli transport ATP-binding protein CydD SW:CYDD_ECOLI (P29018) (588 aa) fasta scores: E(): 0, 65.6% id in 588 aa, and to Providencia stuartii transport ATP-binding protein AarD SW:AARD_PROST (Q52402) (588 aa) fasta scores: E(): 0, 69.9% id in 588 aa. In E. coli, functional CydD is necessary for the formation of the cytochrome bd quinol oxidase. | Similar to Escherichia coli transport ATP-binding protein CydC SW:CYDC_ECOLI (P23886) (573 aa) fasta scores: E(): 0, 65.6% id in 572 aa, and to Shigella flexneri putative ABC transporter CydC TR:O52574 (EMBL:AF040718) (573 aa) fasta scores: E(): 0, 64.9% id in 572 aa. In E. coli, functional CydC is necessary for the formation of the cytochrome bd quinol oxidase. | 0.999 |
| infA | aat | YPO1370 | YPO1371 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.635 |
| tyrA | aat | YPO3285 | YPO1371 | Similar to Escherichia coli T-protein [includes: chorismate mutase and prephenate dehydrogenase] TyrA SW:TYRA_ECOLI (P07023) (373 aa) fasta scores: E(): 0, 86.9% id in 373 aa, and to Erwinia herbicola T-protein [includes: chorismate mutase and prephenate dehydrogenase] TyrA SW:TYRA_ERWHE (Q02287) (373 aa) fasta scores: E(): 0, 86.0% id in 372 aa. | Putative leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.416 |
| tyrA | aroQ | YPO3285 | YPO3660 | Similar to Escherichia coli T-protein [includes: chorismate mutase and prephenate dehydrogenase] TyrA SW:TYRA_ECOLI (P07023) (373 aa) fasta scores: E(): 0, 86.9% id in 373 aa, and to Erwinia herbicola T-protein [includes: chorismate mutase and prephenate dehydrogenase] TyrA SW:TYRA_ERWHE (Q02287) (373 aa) fasta scores: E(): 0, 86.0% id in 372 aa. | Putative class II dehydroquinase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.610 |