STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnNPhnN protein; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP). (193 aa)    
Predicted Functional Partners:
phnL
Similar to Escherichia coli phosphonates transport ATP-binding protein PhnL SW:PHNL_ECOLI (P16679) (226 aa) fasta scores: E(): 0, 76.5% id in 221 aa.
 
  
 0.977
phnM
PhnM protein; Similar to Escherichia coli PhnM protein SW:PHNM_ECOLI (P16689) (378 aa) fasta scores: E(): 0, 73.5% id in 378 aa, and to Rhizobium leguminosarum PhnM TR:Q9XAT4 (EMBL:AJ243305) (376 aa) fasta scores: E(): 8.5e-33, 32.6% id in 386 aa.
 
  
 0.976
phnJ
PhnJ protein; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
  
 0.964
phnG
PhnG protein; Similar to Escherichia coli PhnG protein SW:PHNG_ECOLI (P16685) (150 aa) fasta scores: E(): 6e-22,50.6% id in 158 aa.
 
  
 0.961
phnH
PhnH protein; Similar to Escherichia coli PhnH protein SW:PHNH_ECOLI (P16686) (194 aa) fasta scores: E(): 8.8e-25,48.8% id in 209 aa.
 
  
 0.950
phnK
Similar to Escherichia coli phosphonates transport ATP-binding protein PhnK SW:PHNK_ECOLI (P16678) (252 aa) fasta scores: E(): 0, 85.5% id in 255 aa, and to Rhizobium meliloti PhnK TR:Q52988 (EMBL:M96263) (258 aa) fasta scores: E(): 0, 66.8% id in 253 aa.
 
  
 0.943
phnI
PhnI protein; Similar to Escherichia coli PhnI protein SW:PHNI_ECOLI (P16687) (354 aa) fasta scores: E(): 0, 74.5% id in 353 aa, and to Rhizobium meliloti PhnI protein SW:PHNI_RHIME (Q52986) (368 aa) fasta scores: E(): 0, 59.8% id in 363 aa.
 
  
 0.942
phnP
PhnP protein; Similar to Escherichia coli PhnP protein SW:PHNP_ECOLI (P16692) (252 aa) fasta scores: E(): 0, 50.6% id in 247 aa.
 
  
 0.908
phnF
Probable gntR-family transcriptional regulatory protein; Similar to Escherichia coli PhnF protein SW:PHNF_ECOLI (P16684) (241 aa) fasta scores: E(): 0, 73.4% id in 241 aa, and to Pseudomonas aeruginosa probable transcriptional regulator PA3381 TR:AAG06769 (EMBL:AE004759) (240 aa) fasta scores: E(): 9e-26, 43.3% id in 233 aa.
 
  
 0.904
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
     
  0.882
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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