STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ugpCSn-glycerol-3-phosphate transport, ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (357 aa)    
Predicted Functional Partners:
ugpE
Sn-glycerol-3-phosphate transport system,permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.998
ugpA
Sn-glycerol-3-phosphate transport system,permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.997
ugpB
Glycerol-3-phosphate-binding periplasmic protein; sn-glycerol-3-phosphate and glycerophosphoryl diester-binding protein interacts with the binding protein-dependent transport system UgpACE.
 
 0.965
YPO0854
Similar to Streptococcus pneumoniae maltodextrin transport system permease protein MalD SW:MALD_STRPN (Q04699) (277 aa) fasta scores: E(): 0, 42.0% id in 274 aa,and to Bacillus halodurans hypothetical maltose/maltodextrin transport system BH2021 TR:Q9KBA7 (EMBL:AP001514) (283 aa) fasta scores: E(): 0, 69.6% id in 280 aa.
 
 0.961
YPO2475
Similar to Thermotoga maritima possible sugar ABC transporter permease protein TM1853 TR:Q9X2G8 (EMBL:AE001822) (273 aa) fasta scores: E(): 0, 52.9% id in 274 aa, and to Xylella fastidiosa ABC transporter sugar permease XF2446 TR:Q9PAP9 (EMBL:AE004053) (278 aa) fasta scores: E(): 1.9e-30, 32.8% id in 268 aa.
 
 0.953
YPO1895
Putative binding-protein-dependent transport system, inner membrane component; Previously sequenced as Yersinia pestis inner membrane transport protein TR:Q9ZC24 (EMBL:AL031866) (275 aa) fasta scores: E(): 0, 100.0% id in 275 aa. Similar to Pseudomonas fluorescens probable ABC transporter permease protein MtlG TR:O30493 (EMBL:AF007800) (276 aa) fasta scores: E(): 0, 39.5% id in 258 aa.
 
 0.948
YPO1894
Putative binding-protein-dependent transport system, inner membrane component; Previously sequenced as Yersinia pestis probable ABC transporter protein Orf82 (EMBL:AL031866) (286 aa) fasta scores: E(): 0, 100.0% id in 286 aa.
  
  0.944
YPO3470
Similar to Synechocystis sp. lactose transport system permease protein LacG or Slr1723 TR:P73854 (EMBL:D90910) (270 aa) fasta scores: E(): 1.1e-29, 36.3% id in 281 aa, and to Thermotoga maritima sugar ABC transporter, permease protein Tm0430 TR:Q9WYR1 (EMBL:AE001721) (271 aa) fasta scores: E(): 9.7e-28, 31.9% id in 270 aa.
 
 0.943
YPO3471
Similar to Synechocystis sp. lactose transport system permease protein LacF or Slr1202 TR:P73352 (EMBL:D90905) (298 aa) fasta scores: E(): 0, 34.2% id in 284 aa, and to Bacillus halodurans sugar transport system Bh3689 TR:Q9K6N9 (EMBL:AP001519) (300 aa) fasta scores: E(): 4.2e-32, 35.7% id in 277 aa.
  
  0.943
YPO0614
Putative permease; Similar to Bacillus halodurans possible sugar transport system protein BH1926 TR:Q9KBK0 (EMBL:AP001513) (285 aa) fasta scores: E(): 1.4e-30, 35.9% id in 273 aa,and to Bacillus halodurans sugar transport system protein BH1866 TR:Q9KBQ9 (EMBL:AP001513) (285 aa) fasta scores: E(): 2.5e-30, 34.2% id in 269 aa.
 
 0.942
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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