STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5KAE4_CRYNJNucleolar essential protein 1, putative. (334 aa)    
Predicted Functional Partners:
A0A0S2LI92
WD_REPEATS_REGION domain-containing protein.
   
  0.999
UTP10
U3 small nucleolar RNA-associated protein 10; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity).
   
 0.999
Q5K8R9_CRYNJ
U3 small nucleolar RNA-associated protein 11, putative.
   
 0.999
Q5KEP9_CRYNJ
CBF domain-containing protein.
   
 0.999
Q5KGF9_CRYNJ
PINc domain-containing protein.
   
 0.999
Q5KHS1_CRYNJ
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
  
 0.999
Q5KIJ7_CRYNJ
U3 small nucleolar RNA-associated protein 22.
   
 0.999
Q5KM38_CRYNJ
Uncharacterized protein.
   
 0.999
Q5KMT6_CRYNJ
WD_REPEATS_REGION domain-containing protein.
   
 0.999
NOP58
Nucleolar protein 58; Required for pre-18S rRNA processing. May bind microtubules (By similarity); Belongs to the NOP5/NOP56 family.
   
 0.998
Your Current Organism:
Cryptococcus neoformans
NCBI taxonomy Id: 214684
Other names: C. neoformans var. neoformans JEC21, Cryptococcus neoformans JEC21, Cryptococcus neoformans var. neoformans JEC21, Cryptococcus neoformans var. neoformans serotype D JEC21, Cryptococcus neoformans var. neoformans strain JEC21, Filobasidiella neoformans var. neoformans strain JEC21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.