STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5KD79_CRYNJPseudouridine synthase, putative. (867 aa)    
Predicted Functional Partners:
Q5KIM1_CRYNJ
PseudoU_synth_2 domain-containing protein.
    
 
 0.944
Q5KBB0_CRYNJ
Ribosomal_L18e/L15P domain-containing protein.
   
   0.892
Q5K9N6_CRYNJ
G domain-containing protein.
   
   0.886
Q5KM48_CRYNJ
Mitochondrial ribosomal protein L23, putative.
   
   0.886
Q5KI31_CRYNJ
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.883
Q5KB51_CRYNJ
L51_S25_CI-B8 domain-containing protein.
   
   0.873
Q5KMF3_CRYNJ
60s ribosomal protein l19, mitochondrial, putative; Belongs to the universal ribosomal protein uL11 family.
   
   0.873
Q5KBH0_CRYNJ
Uncharacterized protein.
    
   0.871
Q5KGQ8_CRYNJ
Ribosomal large subunit assembly and maintenance-related protein, putative; Belongs to the universal ribosomal protein uL3 family.
    
   0.871
Q5KLJ6_CRYNJ
Structural constituent of ribosome, putative.
   
   0.860
Your Current Organism:
Cryptococcus neoformans
NCBI taxonomy Id: 214684
Other names: C. neoformans var. neoformans JEC21, Cryptococcus neoformans JEC21, Cryptococcus neoformans var. neoformans JEC21, Cryptococcus neoformans var. neoformans serotype D JEC21, Cryptococcus neoformans var. neoformans strain JEC21, Filobasidiella neoformans var. neoformans strain JEC21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.