STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5KPU6_CRYNJAldo_ket_red domain-containing protein. (334 aa)    
Predicted Functional Partners:
Q5KC92_CRYNJ
Expressed protein.
   
 0.472
Q5KBE4_CRYNJ
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.460
SEC13
Protein transport protein SEC13; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport facto [...]
    
 0.454
Q5KMN4_CRYNJ
Ion_trans domain-containing protein.
    
 0.442
Q5KMM8_CRYNJ
Nucleoporin nup189, putative.
    
 0.439
Q5KP67_CRYNJ
Uncharacterized protein.
    
 0.439
Q5KMI1_CRYNJ
L-lactate dehydrogenase (Cytochrome), putative.
   
 
 0.409
Q5KD34_CRYNJ
L-mandelate dehydrogenase, putative.
   
 
 0.408
Q5K8T4_CRYNJ
Uncharacterized protein.
   
 
 0.402
Q5KCJ4_CRYNJ
Cytochrome b2, mitochondrial, putative.
   
 
 0.402
Your Current Organism:
Cryptococcus neoformans
NCBI taxonomy Id: 214684
Other names: C. neoformans var. neoformans JEC21, Cryptococcus neoformans JEC21, Cryptococcus neoformans var. neoformans JEC21, Cryptococcus neoformans var. neoformans serotype D JEC21, Cryptococcus neoformans var. neoformans strain JEC21, Filobasidiella neoformans var. neoformans strain JEC21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.