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UBI1 protein (Cryptococcus neoformans JEC21) - STRING interaction network
"UBI1" - Ubiquitin-carboxy extension protein fusion in Cryptococcus neoformans JEC21
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBI1Ubiquitin-carboxy extension protein fusion; Ubiquitin- exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked- Lys-6-linked may [...] (129 aa)    
Predicted Functional Partners:
CNA07490
Ribosomal protein L35 (127 aa)
     
  0.999
CNJ01560
60s ribosomal protein l20 (yl17) (267 aa)
     
  0.999
CNA06200
Hypothetical protein (263 aa)
     
  0.999
CNA00250
60s ribosomal protein l9 (191 aa)
     
  0.999
CNM02240
Hypothetical protein (129 aa)
     
  0.999
CND02960
Hypothetical protein (143 aa)
     
  0.999
RPS1
40s ribosomal protein s3ae-a (s1-a) (259 aa)
     
  0.999
CNK02900
Ribosomal protein 22 of the small subunit (130 aa)
     
  0.999
CNA07980
60s ribosomal protein l34-b (113 aa)
     
  0.999
CNI01120
40S ribosomal protein S7 (199 aa)
     
  0.999
Your Current Organism:
Cryptococcus neoformans JEC21
NCBI taxonomy Id: 214684
Other names: C. neoformans var. neoformans JEC21, Cryptococcus neoformans JEC21, Cryptococcus neoformans var. neoformans JEC21, Cryptococcus neoformans var. neoformans serotype D JEC21, Cryptococcus neoformans var. neoformans strain JEC21, Filobasidiella neoformans var. neoformans strain JEC21
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