STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUS1Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] (123 aa)    
Predicted Functional Partners:
A0A316YVW7
Bromo domain-containing protein.
    
 0.995
A0A316Z1B4
Ubiquitinyl hydrolase 1.
    
 0.995
A0A316YSI0
SCA7-domain-containing protein.
    
 0.992
A0A316YDF9
Uncharacterized protein.
    
 
 0.991
A0A316YNV6
SAGA-associated factor 11.
    
 0.982
A0A316YTY7
SGF29 C-terminal domain-containing protein.
   
 0.982
A0A316YD79
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.978
A0A316YEM7
TFIID_20kDa domain-containing protein.
   
 0.977
A0A316YI43
TAF-domain-containing protein.
    
 0.975
A0A316YRF8
Uncharacterized protein.
    
 0.973
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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