A0A316YV46 protein (Acaromyces ingoldii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A316YV46

Uncharacterized protein. (1394 aa)

Predicted Functional Partners:

A0A316YZH9

0.743

A0A316YHJ9

0.698

A0A316YMF3

0.678

A0A316YF39

0.675

A0A316YIE2

0.657

A0A316YT27

0.607

A0A316YEW5

0.568

A0A316YLV4

0.568

A0A316Z1L6

0.549

A0A316YI65

0.546

Your Current Organism:

Acaromyces ingoldii

NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316YEW5	A0A316YHJ9	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein; Belongs to the complex I LYR family.	0.937
A0A316YEW5	A0A316YIE2	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.594
A0A316YEW5	A0A316YMF3	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Putative GLN1-glutamate--ammonia ligase; Belongs to the glutamine synthetase family.	0.774
A0A316YEW5	A0A316YV46	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.568
A0A316YF39	A0A316YT27	Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.	Uncharacterized protein.	0.851
A0A316YF39	A0A316YV46	Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.	Uncharacterized protein.	0.675
A0A316YHJ9	A0A316YEW5	Uncharacterized protein; Belongs to the complex I LYR family.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.937
A0A316YHJ9	A0A316YIE2	Uncharacterized protein; Belongs to the complex I LYR family.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.788
A0A316YHJ9	A0A316YV46	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.698
A0A316YHJ9	A0A316YZH9	Uncharacterized protein; Belongs to the complex I LYR family.	GTP-binding protein ypt1.	0.928
A0A316YI65	A0A316YLV4	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.775
A0A316YI65	A0A316YV46	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.546
A0A316YI65	A0A316Z1L6	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.751
A0A316YIE2	A0A316YEW5	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.594
A0A316YIE2	A0A316YHJ9	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	Uncharacterized protein; Belongs to the complex I LYR family.	0.788
A0A316YIE2	A0A316YLV4	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	Uncharacterized protein.	0.724
A0A316YIE2	A0A316YV46	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	Uncharacterized protein.	0.657
A0A316YIE2	A0A316YZH9	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	GTP-binding protein ypt1.	0.728
A0A316YLV4	A0A316YI65	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.775
A0A316YLV4	A0A316YIE2	Uncharacterized protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.724