STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104923937Cathepsin S. (339 aa)    
Predicted Functional Partners:
LOC104939569
Apoptosis regulator Bcl-2-like.
   
 
 0.904
ctsd
Cathepsin D.
   
 0.675
LOC104934542
Baculoviral IAP repeat-containing protein 2/3.
     
 0.672
xiap
E3 ubiquitin-protein ligase XIAP.
     
 0.663
LOC104932614
Baculoviral IAP repeat-containing protein 5.1-A.
     
 0.661
LOC104918068
Baculoviral IAP repeat-containing protein 5.2.
     
 0.661
LOC104929231
Bcl-2-like 1 (apoptosis regulator Bcl-X).
     
 0.656
LOC104939421
Bcl-2-like 1 (apoptosis regulator Bcl-X).
     
 0.656
LOC104924100
Cathepsin D.
   
 0.614
cst7
Cystatin-F.
   
 
 0.567
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.