STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trappc4Trafficking protein particle complex subunit 4. (219 aa)    
Predicted Functional Partners:
trappc3
Trafficking protein particle complex subunit 3.
   
 0.999
trappc2
Trafficking protein particle complex subunit 2.
    
 0.999
trappc2l
Trafficking protein particle complex 2 like.
   
 0.998
trappc8
Trafficking protein particle complex subunit 8 isoform X1.
    
 0.997
trappc10
Trafficking protein particle complex subunit 10.
    
 0.996
trappc9
Trafficking protein particle complex subunit 9 isoform X1.
   
 0.996
trappc11
Trafficking protein particle complex subunit 11.
    
 0.995
trappc12
Trafficking protein particle complex subunit 12 isoform X2.
    
 0.988
trappc1
Trafficking protein particle complex subunit 1.
   
 0.977
ENSLCRP00005051225
annotation not available
   
 0.977
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.