STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104922982Probable isoprenylcysteine alpha-carbonyl methylesterase ICME. (369 aa)    
Predicted Functional Partners:
LOC104939945
Calcium/calmodulin-dependent serine protein kinase.
   
 0.494
CASK
Calcium/calmodulin-dependent serine protein kinase.
   
 0.494
wdr43
U3 small nucleolar RNA-associated protein 5.
   
 0.461
rps6
Small subunit ribosomal protein S6e.
   
  0.458
rps7
Small subunit ribosomal protein S7e.
    
 0.453
emg1
RRNA small subunit pseudouridine methyltransferase Nep1.
   
  0.451
wdr46
U3 small nucleolar RNA-associated protein 7.
   
  0.449
utp11
Probable U3 small nucleolar RNA-associated protein 11.
    
  0.449
dcaf13
DDB1- and CUL4-associated factor 13.
   
  0.449
fcf1
U3 small nucleolar RNA-associated protein 24.
    
  0.449
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.