STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104922834MAGUK p55 subfamily member 6 isoform X1. (586 aa)    
Predicted Functional Partners:
lin7c
Protein lin-7 homolog C isoform X1.
    
 0.708
lin7a
Protein lin-7 homolog A isoform X2.
    
 0.708
lin7b
Protein lin-7 homolog B.
    
 0.708
APBA1
Amyloid beta A4 precursor protein-binding family A member 1.
   
 0.638
LOC104919408
Amyloid beta A4 precursor protein-binding family A member 2.
   
 0.638
LOC104928390
Amyloid-beta A4 precursor protein-binding family A member 3.
   
 0.638
LOC104937851
Amyloid beta A4 precursor protein-binding family A member 2.
   
 0.638
LOC104922901
Amyloid beta A4 precursor protein-binding family A member 1.
   
 0.638
LOC104924351
Calcium/calmodulin-dependent protein kinase type II delta 2 chain isoform X4.
 
  
 0.596
whrn
Whirlin isoform X1.
    
 0.593
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.