STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd34cAnkyrin repeat domain-containing protein 34C. (529 aa)    
Predicted Functional Partners:
ift81
Intraflagellar transport protein 81 homolog.
    
 0.479
ift88
Intraflagellar transport 88.
   
 0.450
fam110b
Protein FAM110B.
      
 0.447
ift52
Intraflagellar transport protein 52 homolog.
    
 0.445
ift22
Intraflagellar transport protein 22 homolog.
    
 0.440
LOC104923377
Tetratricopeptide repeat protein 30A isoform X1.
    
 0.422
ubxn7
UBX domain-containing protein 7.
    
 0.422
ift57
Intraflagellar transport protein 57 homolog isoform X1.
    
 0.417
ift80
Intraflagellar transport protein 80 homolog.
    
 0.410
ift172
Intraflagellar transport protein 172 homolog.
    
 0.405
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.