STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srek1ip1Protein SREK1IP1. (210 aa)    
Predicted Functional Partners:
smim15
Small integral membrane protein 15.
      
 0.586
creg2
Cellular repressor of E1A stimulated genes 2.
      
 0.568
wipf1
WAS/WASL-interacting protein family member 1.
      
 0.497
rrp15
RRP15-like protein.
      
 0.451
LOC104924252
SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X2.
      
 0.426
dis3l2
DIS3-like exonuclease 2 isoform X2.
      
 0.412
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.